Update config files to use stow

nvim/.config/nvim/.stylua.toml

@@ -0,0 +1,6 @@
+column_width = 160
+line_endings = "Unix"
+indent_type = "Spaces"
+indent_width = 2
+quote_style = "AutoPreferSingle"
+call_parentheses = "None"

nvim/.config/nvim/init.lua

@@ -0,0 +1,14 @@
+-- Set ',' as the leader key
+vim.g.mapleader = ','
+vim.g.maplocalleader = ','
+
+-- Set to true if you have a Nerd Font installed and selected in the terminal
+vim.g.have_nerd_font = true
+
+require 'options'
+require 'keymaps'
+
+require 'config.lazy'
+require 'config.lsp'
+
+vim.cmd.colorscheme 'catppuccin-mocha'

nvim/.config/nvim/lazy-lock.json

@@ -0,0 +1,12 @@
+{
+  "catppuccin": { "branch": "main", "commit": "beaf41a30c26fd7d6c386d383155cbd65dd554cd" },
+  "conform.nvim": { "branch": "master", "commit": "c2526f1cde528a66e086ab1668e996d162c75f4f" },
+  "lazy.nvim": { "branch": "main", "commit": "306a05526ada86a7b30af95c5cc81ffba93fef97" },
+  "neo-tree.nvim": { "branch": "main", "commit": "f3df514fff2bdd4318127c40470984137f87b62e" },
+  "nui.nvim": { "branch": "main", "commit": "de740991c12411b663994b2860f1a4fd0937c130" },
+  "nvim-web-devicons": { "branch": "master", "commit": "746ffbb17975ebd6c40142362eee1b0249969c5c" },
+  "plenary.nvim": { "branch": "master", "commit": "b9fd5226c2f76c951fc8ed5923d85e4de065e509" },
+  "telescope-fzf-native.nvim": { "branch": "main", "commit": "6fea601bd2b694c6f2ae08a6c6fab14930c60e2c" },
+  "telescope.nvim": { "branch": "master", "commit": "a0bbec21143c7bc5f8bb02e0005fa0b982edc026" },
+  "vimtex": { "branch": "master", "commit": "f707368022cdb851716be0d2970b90599c84a6a6" }
+}

nvim/.config/nvim/lsp/lua_ls.lua

@@ -0,0 +1,30 @@
+-- config for lua-language-server
+return {
+  -- Command and arguments to start the server.
+  cmd = { 'lua-language-server' },
+
+  -- Filetypes to automatically attach to.
+  filetypes = { 'lua' },
+
+  -- Sets the "root directory" to the parent directory of the file in the
+  -- current buffer that contains either a ".luarc.json" or a
+  -- ".luarc.jsonc" file. Files that share a root directory will reuse
+  -- the connection to the same LSP server.
+  -- Nested lists indicate equal priority, see |vim.lsp.Config|.
+  root_markers = { { '.luarc.json', '.luarc.jsonc' }, '.git' },
+
+  -- Specific settings to send to the server. The schema for this is
+  -- defined by the server. For example the schema for lua-language-server
+  -- can be found here https://raw.githubusercontent.com/LuaLS/vscode-lua/master/setting/schema.json
+  settings = {
+    Lua = {
+      runtime = {
+        version = 'LuaJIT',
+      },
+      diagnostics = {
+        -- Get the language server to recognize the `vim` global
+        globals = { 'vim' },
+      },
+    }
+  }
+}

nvim/.config/nvim/lsp/pyright.lua

@@ -0,0 +1,59 @@
+local function set_python_path(command)
+  local path = command.args
+  local clients = vim.lsp.get_clients {
+    bufnr = vim.api.nvim_get_current_buf(),
+    name = 'pyright',
+  }
+  for _, client in ipairs(clients) do
+    if client.settings then
+      client.settings.python = vim.tbl_deep_extend('force', client.settings.python, { pythonPath = path })
+    else
+      client.config.settings = vim.tbl_deep_extend('force', client.config.settings, { python = { pythonPath = path } })
+    end
+    client:notify('workspace/didChangeConfiguration', { settings = nil })
+  end
+end
+
+---@type vim.lsp.Config
+return {
+  cmd = { 'pyright-langserver', '--stdio' },
+  filetypes = { 'python' },
+  root_markers = {
+    'pyproject.toml',
+    'setup.py',
+    'setup.cfg',
+    'requirements.txt',
+    'Pipfile',
+    'pyrightconfig.json',
+    '.git',
+  },
+  settings = {
+    python = {
+      analysis = {
+        autoSearchPaths = true,
+        useLibraryCodeForTypes = true,
+        diagnosticMode = 'openFilesOnly',
+      },
+    },
+  },
+  on_attach = function(client, bufnr)
+    vim.api.nvim_buf_create_user_command(bufnr, 'LspPyrightOrganizeImports', function()
+      local params = {
+        command = 'pyright.organizeimports',
+        arguments = { vim.uri_from_bufnr(bufnr) },
+      }
+
+      -- Using client.request() directly because "pyright.organizeimports" is private
+      -- (not advertised via capabilities), which client:exec_cmd() refuses to call.
+      -- https://github.com/neovim/neovim/blob/c333d64663d3b6e0dd9aa440e433d346af4a3d81/runtime/lua/vim/lsp/client.lua#L1024-L1030
+      client.request('workspace/executeCommand', params, nil, bufnr)
+    end, {
+      desc = 'Organize Imports',
+    })
+    vim.api.nvim_buf_create_user_command(bufnr, 'LspPyrightSetPythonPath', set_python_path, {
+      desc = 'Reconfigure pyright with the provided python path',
+      nargs = 1,
+      complete = 'file',
+    })
+  end,
+}

nvim/.config/nvim/lsp/ts_ls.lua

@@ -0,0 +1,81 @@
+return {
+  init_options = { hostInfo = 'neovim' },
+  cmd = { 'typescript-language-server', '--stdio' },
+  filetypes = {
+    'javascript',
+    'javascriptreact',
+    'javascript.jsx',
+    'typescript',
+    'typescriptreact',
+    'typescript.tsx',
+  },
+  root_dir = function(bufnr, on_dir)
+    -- The project root is where the LSP can be started from
+    -- As stated in the documentation above, this LSP supports monorepos and simple projects.
+    -- We select then from the project root, which is identified by the presence of a package
+    -- manager lock file.
+    local root_markers = { 'package-lock.json', 'yarn.lock', 'pnpm-lock.yaml', 'bun.lockb', 'bun.lock' }
+    -- Give the root markers equal priority by wrapping them in a table
+    root_markers = vim.fn.has 'nvim-0.11.3' == 1 and { root_markers, { '.git' } } or vim.list_extend(root_markers, { '.git' })
+    -- We fallback to the current working directory if no project root is found
+    local project_root = vim.fs.root(bufnr, root_markers) or vim.fn.getcwd()
+
+    on_dir(project_root)
+  end,
+  handlers = {
+    -- handle rename request for certain code actions like extracting functions / types
+    ['_typescript.rename'] = function(_, result, ctx)
+      local client = assert(vim.lsp.get_client_by_id(ctx.client_id))
+      vim.lsp.util.show_document({
+        uri = result.textDocument.uri,
+        range = {
+          start = result.position,
+          ['end'] = result.position,
+        },
+      }, client.offset_encoding)
+      vim.lsp.buf.rename()
+      return vim.NIL
+    end,
+  },
+  commands = {
+    ['editor.action.showReferences'] = function(command, ctx)
+      local client = assert(vim.lsp.get_client_by_id(ctx.client_id))
+      local file_uri, position, references = unpack(command.arguments)
+
+      local quickfix_items = vim.lsp.util.locations_to_items(references, client.offset_encoding)
+      vim.fn.setqflist({}, ' ', {
+        title = command.title,
+        items = quickfix_items,
+        context = {
+          command = command,
+          bufnr = ctx.bufnr,
+        },
+      })
+
+      vim.lsp.util.show_document({
+        uri = file_uri,
+        range = {
+          start = position,
+          ['end'] = position,
+        },
+      }, client.offset_encoding)
+
+      vim.cmd 'botright copen'
+    end,
+  },
+  on_attach = function(client, bufnr)
+    -- ts_ls provides `source.*` code actions that apply to the whole file. These only appear in
+    -- `vim.lsp.buf.code_action()` if specified in `context.only`.
+    vim.api.nvim_buf_create_user_command(bufnr, 'LspTypescriptSourceAction', function()
+      local source_actions = vim.tbl_filter(function(action)
+        return vim.startswith(action, 'source.')
+      end, client.server_capabilities.codeActionProvider.codeActionKinds)
+
+      vim.lsp.buf.code_action {
+        context = {
+          only = source_actions,
+        },
+      }
+    end, {})
+  end,
+}

nvim/.config/nvim/lua/config/lazy.lua

@@ -0,0 +1,48 @@
+-- Bootstrap lazy.nvim
+local lazypath = vim.fn.stdpath 'data' .. '/lazy/lazy.nvim'
+if not (vim.uv or vim.loop).fs_stat(lazypath) then
+  local lazyrepo = 'https://github.com/folke/lazy.nvim.git'
+  local out = vim.fn.system { 'git', 'clone', '--filter=blob:none', '--branch=stable', lazyrepo, lazypath }
+  if vim.v.shell_error ~= 0 then
+    vim.api.nvim_echo({
+      { 'Failed to clone lazy.nvim:\n', 'ErrorMsg' },
+      { out, 'WarningMsg' },
+      { '\nPress any key to exit...' },
+    }, true, {})
+    vim.fn.getchar()
+    os.exit(1)
+  end
+end
+vim.opt.rtp:prepend(lazypath)
+
+-- Setup lazy.nvim
+require('lazy').setup {
+  spec = {
+    -- import your plugins
+    { import = 'plugins' },
+  },
+  -- Configure any other settings here. See the documentation for more details.
+  -- colorscheme that will be used when installing plugins.
+  install = { colorscheme = { 'catppuccin-mocha' } },
+  -- automatically check for plugin updates
+  checker = { enabled = true, notify = false },
+  ui = {
+    -- If you are using a Nerd Font: set icons to an empty table which will use the
+    -- default lazy.nvim defined Nerd Font icons, otherwise define a unicode icons table
+    icons = vim.g.have_nerd_font and {} or {
+      cmd = '⌘',
+      config = '🛠',
+      event = '📅',
+      ft = '📂',
+      init = '⚙',
+      keys = '🗝',
+      plugin = '🔌',
+      runtime = '💻',
+      require = '🌙',
+      source = '📄',
+      start = '🚀',
+      task = '📌',
+      lazy = '💤 ',
+    },
+  },
+}

nvim/.config/nvim/lua/config/lsp.lua

@@ -0,0 +1,30 @@
+-- enables LSPs and configures useful bindings
+
+vim.lsp.enable 'lua_ls'
+vim.lsp.enable 'ts_ls'
+vim.lsp.enable 'pyright'
+
+vim.api.nvim_create_autocmd('LspAttach', {
+  callback = function(ev)
+    local client = vim.lsp.get_client_by_id(ev.data.client_id)
+    if client and client:supports_method(vim.lsp.protocol.Methods.textDocument_completion) then
+      vim.opt.completeopt = { 'menu', 'menuone', 'noinsert', 'fuzzy', 'popup' }
+      vim.lsp.completion.enable(true, client.id, ev.buf, { autotrigger = true })
+      vim.keymap.set('i', '<C-Space>', function()
+        vim.lsp.completion.get()
+      end)
+    end
+  end,
+})
+
+-- Diagnostics
+vim.diagnostic.config {
+  -- Use the default configuration
+  -- virtual_lines = true
+
+  -- Alternatively, customize specific options
+  virtual_lines = {
+    -- Only show virtual line diagnostics for the current cursor line
+    current_line = true,
+  },
+}

nvim/.config/nvim/lua/keymaps.lua

@@ -0,0 +1,18 @@
+-- [[ Basic Keymaps ]]
+
+-- Clear highlights on search when pressing <Esc> in normal mode
+vim.keymap.set('n', '<Esc>', '<cmd>nohlsearch<CR>')
+
+-- Diagnostic keymaps
+vim.keymap.set('n', '<leader>q', vim.diagnostic.setloclist, { desc = 'Open diagnostic [Q]uickfix list' })
+
+-- Exit terminal mode in the builtin terminal with a shortcut that is a bit easie:
+-- for people to discover. Otherwise, you normally need to press <C-\><C-n>, which
+-- is not what someone will guess without a bit more experience.
+vim.keymap.set('t', '<Esc><Esc>', '<C-\\><C-n>', { desc = 'Exit terminal mode' })
+
+-- Keybinds to make split navigation easier.
+vim.keymap.set('n', '<C-h>', '<C-w><C-h>', { desc = 'Move focus to the left window' })
+vim.keymap.set('n', '<C-l>', '<C-w><C-l>', { desc = 'Move focus to the right window' })
+vim.keymap.set('n', '<C-j>', '<C-w><C-j>', { desc = 'Move focus to the lower window' })
+vim.keymap.set('n', '<C-k>', '<C-w><C-k>', { desc = 'Move focus to the upper window' })

nvim/.config/nvim/lua/options.lua

@@ -0,0 +1,67 @@
+-- [[ Setting options ]]
+-- See `:help vim.o`
+
+-- Make line numbers default
+vim.o.relativenumber = true
+
+-- Enable mouse mode, can be useful for resizing splits for example!
+vim.o.mouse = 'a'
+
+-- Don't show the mode, since it's already in the status line
+vim.o.showmode = false
+
+-- Sync clipboard between OS and Neovim.
+--  Schedule the setting after `UiEnter` because it can increase startup-time.
+--  Remove this option if you want your OS clipboard to remain independent.
+--  See `:help 'clipboard'`
+vim.schedule(function()
+  vim.o.clipboard = 'unnamedplus'
+end)
+
+-- Enable break indent
+vim.o.breakindent = true
+
+-- Save undo history
+vim.o.undofile = true
+
+-- Case-insensitive searching UNLESS \C or one or more capital letters in the search term
+vim.o.ignorecase = true
+vim.o.smartcase = true
+
+-- Keep signcolumn on by default
+vim.o.signcolumn = 'yes'
+
+-- Decrease update time
+vim.o.updatetime = 250
+
+-- Decrease mapped sequence wait time
+vim.o.timeoutlen = 300
+
+-- Configure how new splits should be opened
+vim.o.splitright = true
+vim.o.splitbelow = true
+
+-- Sets how neovim will display certain whitespace characters in the editor.
+vim.o.list = true
+vim.opt.listchars = { tab = '» ', trail = '·', nbsp = '␣' }
+
+-- Preview substitutions live, as you type!
+vim.o.inccommand = 'split'
+
+-- Show which line your cursor is on
+vim.o.cursorline = true
+
+-- Minimal number of screen lines to keep above and below the cursor.
+vim.o.scrolloff = 10
+
+-- if performing an operation that would fail due to unsaved changes in the buffer (like `:q`),
+-- instead raise a dialog asking if you wish to save the current file(s)
+-- See `:help 'confirm'`
+vim.o.confirm = true
+
+-- default tab/space configuration
+vim.o.tabstop = 2
+vim.o.softtabstop = 2
+vim.o.shiftwidth = 2
+vim.o.expandtab = true
+

nvim/.config/nvim/lua/plugins/catppuccin.lua

@@ -0,0 +1,3 @@
+return {
+  'catppuccin/nvim', name = 'catppuccin', priority = 1000
+}

nvim/.config/nvim/lua/plugins/conform.lua

@@ -0,0 +1,28 @@
+return {
+  {
+    'stevearc/conform.nvim',
+    opts = {
+      formatters = {
+        prettier_markdown = {
+          command = 'prettier',
+          args = {
+            '--parser=markdown',
+            '--prose-wrap',
+            'always',
+            '--print-width',
+            '120',
+          },
+        },
+      },
+      formatters_by_ft = {
+        lua = { 'stylua' },
+        markdown = { 'prettier_markdown' },
+        javascript = { 'prettier' },
+      },
+      format_on_save = {
+        timeout_ms = 500,
+        lsp_format = 'fallback',
+      },
+    },
+  },
+}

nvim/.config/nvim/lua/plugins/neotree.lua

@@ -0,0 +1,15 @@
+return {
+  {
+    "nvim-neo-tree/neo-tree.nvim",
+    version = "*",
+    dependencies = {
+      "nvim-lua/plenary.nvim",
+      "MunifTanjim/nui.nvim",
+      "nvim-tree/nvim-web-devicons", -- optional, but recommended
+    },
+    lazy = false, -- neo-tree will lazily load itself
+    keys = {
+      { '<leader>d', ':Neotree toggle<CR>', desc = 'NeoTree toggle', silent = true }
+    }
+  }
+}

nvim/.config/nvim/lua/plugins/telescope.lua

@@ -0,0 +1,46 @@
+return {
+  {
+    'nvim-telescope/telescope.nvim',
+    tag = '0.1.8',
+    dependencies = {
+      'nvim-lua/plenary.nvim',
+      {
+        'nvim-telescope/telescope-fzf-native.nvim',
+        build = 'make',
+        config = function()
+          require('telescope').load_extension 'fzf'
+        end,
+      },
+    },
+    keys = {
+      {
+        '<leader>t',
+        function()
+          require('telescope.builtin').find_files()
+        end,
+        desc = 'Find file',
+      },
+      {
+        '<leader>f',
+        function()
+          require('telescope.builtin').live_grep()
+        end,
+        desc = 'Codesearch',
+      },
+      {
+        '<leader>g',
+        function()
+          require('telescope.builtin').lsp_references()
+        end,
+        desc = 'View references',
+      },
+    },
+    opts = {
+      pickers = {
+        lsp_references = {
+          theme = 'ivy',
+        },
+      },
+    },
+  },
+}

nvim/.config/nvim/lua/plugins/vimtext.lua

@@ -0,0 +1,12 @@
+return {
+  'lervag/vimtex',
+  lazy = false,
+  ft = { 'tex', 'latex', 'bib' },
+  init = function()
+    vim.g.vimtex_view_method = 'zathura'
+    vim.g.vimtex_compiler_method = 'latexmk'
+  end,
+  keys = {
+    { '<leader>r', '<cmd>VimtexCompile<cr>', desc = 'Compile LaTeX and view PDF', ft = 'tex' },
+  },
+}